Difference between revisions of "Pharmacotyper"
Farmakorakel (talk | contribs) (Ny side: ==Pharmacotyper - getting relevant PGx variants from a patient VCF== The Pharmacotyper extracts relevant variants from a VCF returns ;allele matching : Match variants to PGx alleles by c…) |
Farmakorakel (talk | contribs) (→Pharmacotyper - getting relevant PGx variants from a patient VCF) |
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: Match variants to PGx alleles by custom method. Return list of possible PGx alleles in the nomenclature of the OWL ontology of [[Pharmacoracle]] | : Match variants to PGx alleles by custom method. Return list of possible PGx alleles in the nomenclature of the OWL ontology of [[Pharmacoracle]] | ||
;haplotype queries | ;haplotype queries | ||
| − | : | + | : Return [[Pharmacoracle]] queries based on the PGx alleles |
Revision as of 15:04, 13 July 2018
Pharmacotyper - getting relevant PGx variants from a patient VCF
The Pharmacotyper extracts relevant variants from a VCF returns
- allele matching
- Match variants to PGx alleles by custom method. Return list of possible PGx alleles in the nomenclature of the OWL ontology of Pharmacoracle
- haplotype queries
- Return Pharmacoracle queries based on the PGx alleles
