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Allele definition

83 bytes added, 13:05, 29 August 2018
How to obtain PGx allele definitions from literature
PGx alleles are collected and distributed through various channels
* PGx alleles on JSON-LD format from the [https://api.pharmgkb.org PharmGKB API]
* PGx alleles on Excel-style formats, also accessible through the PharmGKB API (but seems to be hidden from the Swagger documentation, but direct links when searching for haplotype definitions at the pharmgkb.org website)
* [https://github.com/PharmGKB/PharmCAT/tree/master/src/main/resources/org/pharmgkb/pharmcat/definition/alleles PGx alleles for use in PharmCAT] are included in their source code.
* PGx alleles as VCF files from [https://www.pharmvar.org PharmVar]